hello,
I'm going to install CPAS web server in our linux cluster master node. but I cannot find a step-by-step installation document in caps supprot board. Would you please provide some information for cluster setting?
I have 8 dual processor(Itenium)machines on RedHat AS3 (x86_64).
and, I have installed CPAS 2.0 another web server(this is not a cluster). and then I ran a dataset, but unfortunately I got an error message as below
07 May 2007 10:07:47,948 INFO : X! Tandem search for SmallICAT.mzXML
07 May 2007 10:07:47,952 INFO : =======================================
07 May 2007 10:07:48,230 INFO : tandem.exe output
07 May 2007 10:07:48,230 INFO : =======================================
07 May 2007 10:07:48,236 INFO : running: tandem.exe input.xml
07 May 2007 10:07:48,257 INFO :
07 May 2007 10:07:48,257 INFO : X! TANDEM 2 (2007.04.01.1)
07 May 2007 10:07:48,257 INFO :
07 May 2007 10:07:51,879 INFO : Loading spectra .. loaded.
07 May 2007 10:07:51,879 INFO : Spectra matching criteria = 2367
07 May 2007 10:07:51,879 INFO : Pluggable scoring enabled.
07 May 2007 10:07:51,880 INFO : Starting threads . started.
07 May 2007 10:07:51,880 INFO : Computing models:
07 May 2007 10:08:02,830 INFO : S sequences modelled = 0 ks
07 May 2007 10:08:02,855 INFO : Model refinement:
07 May 2007 10:08:02,855 INFO : Creating report:
07 May 2007 10:08:02,893 INFO : initial calculations ..... done.
07 May 2007 10:08:02,893 INFO : sorting ..... done.
07 May 2007 10:08:02,992 INFO : finding repeats ..... done.
07 May 2007 10:08:02,995 INFO : evaluating results ..... done.
07 May 2007 10:08:02,996 INFO : calculating expectations ..... done.
07 May 2007 10:08:04,637 INFO : writing results ..... done.
07 May 2007 10:08:04,649 INFO :
07 May 2007 10:08:04,649 INFO : Valid models = 7
07 May 2007 10:08:04,649 INFO :
07 May 2007 10:08:04,649 INFO :
07 May 2007 10:08:04,812 INFO : Tandem2XML output
07 May 2007 10:08:04,812 INFO : =======================================
07 May 2007 10:08:04,812 INFO : running: Tandem2XML /home/shoo/CPAS/xtandem/1/SmallICAT.work/SmallICAT.xtan.xml /home/shoo/CPAS/xtandem/1/SmallICAT.work/SmallICAT-raw.pep.xml
07 May 2007 10:08:05,330 INFO : xinteract output
07 May 2007 10:08:05,330 INFO : =======================================
07 May 2007 10:08:05,330 INFO : running: xinteract -Opt -nR "-NSmallICAT.pep.xml" "/home/shoo/CPAS/xtandem/1/SmallICAT.work/SmallICAT-raw.pep.xml"
07 May 2007 10:08:05,348 INFO :
07 May 2007 10:08:05,348 INFO : /home/cpas/labkey/bin/tpp/bin/xinteract (TPP v3.0 SQUALL rev.2, Build 200705032136)
07 May 2007 10:08:05,349 INFO : error, cannot parse input file "-NSmallICAT.pep.xml"
07 May 2007 10:08:05,351 ERROR: Failed running xinteract.
Do you have any idea for this error?
Thanks for taking your time to read my question. |