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Xtandem crashed when processing the big mzXML files.

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Xtandem crashed when processing the big mzXML files. andyzcq  2014-06-12 05:58
Status: Closed
 
I used the command line to search mzXML file with Xtandem, and Xtandem works fine when processing rather little mzXML (<800MB).
Xandem always crashed when processing big mzXML file (>1GB), and the screenshot of error is in the attachment.

I do not know how to fix this problem.

Best,
 
 
jeckels responded:  2014-06-12 08:49
If XTandem is crashing when it's being run independently of LabKey Server, I'd suggest that you post on the TransProteomic Pipeline support board:

https://groups.google.com/forum/#!forum/spctools-discuss

We'd be happy to help debug issues using XTandem within LabKey Server, but aren't the primary developers of that build of XTandem itself.

Thanks,
Josh